Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.71□□□□□ -0.05
HOXC12P31275 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.71□□□□□ -0.05
HOXC12P31275 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.71□□□□□ -0.05
HOXC12P31275 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.71□□□□□ -0.05
HOXC12P31275 AL161645.1-201ENST00000622716 1255 ntBASIC14.71□□□□□ -0.05
HOXC12P31275 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HOXC12P31275 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.7□□□□□ -0.06
HOXC12P31275 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.7□□□□□ -0.06
HOXC12P31275 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.7□□□□□ -0.06
HOXC12P31275 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.7□□□□□ -0.06
HOXC12P31275 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 AC092902.6-201ENST00000641783 218 ntBASIC14.7□□□□□ -0.06
HOXC12P31275 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 AC108860.2-201ENST00000562760 2183 ntBASIC14.7□□□□□ -0.06
HOXC12P31275 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HOXC12P31275 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HOXC12P31275 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HOXC12P31275 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
HOXC12P31275 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.69□□□□□ -0.06
HOXC12P31275 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.69□□□□□ -0.06
HOXC12P31275 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.69□□□□□ -0.06
HOXC12P31275 RNA5SP421-201ENST00000516864 134 ntBASIC14.69□□□□□ -0.06
HOXC12P31275 AC109322.1-201ENST00000524499 1264 ntBASIC14.69□□□□□ -0.06
HOXC12P31275 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
HOXC12P31275 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.69□□□□□ -0.06
HOXC12P31275 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.69□□□□□ -0.06
HOXC12P31275 CYP2A7P1-201ENST00000595391 815 ntBASIC14.69□□□□□ -0.06
HOXC12P31275 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.69□□□□□ -0.06
HOXC12P31275 AL031055.1-201ENST00000606362 631 ntBASIC14.69□□□□□ -0.06
HOXC12P31275 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.69□□□□□ -0.06
HOXC12P31275 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms