Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.25■□□□□ 0.99
RXRBP28702 LY6E-208ENST00000520531 490 ntTSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.25■□□□□ 0.99
RXRBP28702 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.25■□□□□ 0.99
RXRBP28702 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.25■□□□□ 0.99
RXRBP28702 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RXRBP28702 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RXRBP28702 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.24■□□□□ 0.99
RXRBP28702 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.24■□□□□ 0.99
RXRBP28702 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
RXRBP28702 ACKR1-201ENST00000368121 1240 ntBASIC21.24■□□□□ 0.99
RXRBP28702 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.24■□□□□ 0.99
RXRBP28702 AL627389.1-201ENST00000413508 1182 ntBASIC21.24■□□□□ 0.99
RXRBP28702 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC21.24■□□□□ 0.99
RXRBP28702 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.24■□□□□ 0.99
RXRBP28702 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
RXRBP28702 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.24■□□□□ 0.99
RXRBP28702 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
RXRBP28702 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.24■□□□□ 0.99
RXRBP28702 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.24■□□□□ 0.99
RXRBP28702 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.24■□□□□ 0.99
RXRBP28702 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RXRBP28702 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.24■□□□□ 0.99
RXRBP28702 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.23■□□□□ 0.99
RXRBP28702 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.23■□□□□ 0.99
RXRBP28702 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.23■□□□□ 0.99
RXRBP28702 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.23■□□□□ 0.99
RXRBP28702 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.23■□□□□ 0.99
RXRBP28702 MIR1202-201ENST00000408529 83 ntBASIC21.23■□□□□ 0.99
RXRBP28702 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.23■□□□□ 0.99
RXRBP28702 RN7SL11P-201ENST00000471305 293 ntBASIC21.23■□□□□ 0.99
RXRBP28702 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.23■□□□□ 0.99
RXRBP28702 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.23■□□□□ 0.99
RXRBP28702 AC005357.2-202ENST00000590507 1060 ntBASIC21.23■□□□□ 0.99
RXRBP28702 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 FRMD8P1-201ENST00000440433 1524 ntBASIC21.23■□□□□ 0.99
RXRBP28702 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RXRBP28702 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
RXRBP28702 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RXRBP28702 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RXRBP28702 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 AL596276.2-201ENST00000447525 331 ntBASIC21.22■□□□□ 0.99
RXRBP28702 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.22■□□□□ 0.99
RXRBP28702 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.22■□□□□ 0.99
RXRBP28702 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.22■□□□□ 0.99
RXRBP28702 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 RN7SL574P-201ENST00000581512 297 ntBASIC21.22■□□□□ 0.99
RXRBP28702 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RXRBP28702 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC21.22■□□□□ 0.99
RXRBP28702 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
RXRBP28702 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RXRBP28702 CYP4F24P-201ENST00000586049 1580 ntBASIC21.22■□□□□ 0.99
RXRBP28702 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.22■□□□□ 0.99
RXRBP28702 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RXRBP28702 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.21■□□□□ 0.99
RXRBP28702 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.21■□□□□ 0.99
RXRBP28702 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.21■□□□□ 0.99
RXRBP28702 NKAIN1P1-201ENST00000435754 582 ntBASIC21.21■□□□□ 0.99
RXRBP28702 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RXRBP28702 AC073352.2-201ENST00000609385 439 ntBASIC21.21■□□□□ 0.99
RXRBP28702 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.21■□□□□ 0.99
RXRBP28702 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.21■□□□□ 0.99
RXRBP28702 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms