Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 AC009336.1-201ENST00000608941 1553 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 AC006449.6-201ENST00000612330 2296 ntBASIC14.04□□□□□ -0.16
VAMP1P23763 LINC00895-201ENST00000629028 1637 ntBASIC14.04□□□□□ -0.16
VAMP1P23763 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 GGT4P-201ENST00000623672 1708 ntBASIC14.04□□□□□ -0.16
VAMP1P23763 AC022532.1-201ENST00000624563 1728 ntBASIC14.04□□□□□ -0.16
VAMP1P23763 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.04□□□□□ -0.16
VAMP1P23763 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.04□□□□□ -0.16
VAMP1P23763 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.04□□□□□ -0.16
VAMP1P23763 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.04□□□□□ -0.16
VAMP1P23763 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.04□□□□□ -0.16
VAMP1P23763 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VAMP1P23763 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VAMP1P23763 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.04□□□□□ -0.16
VAMP1P23763 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC14.04□□□□□ -0.16
VAMP1P23763 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAMP1P23763 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.03□□□□□ -0.16
VAMP1P23763 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 TNRC18P2-201ENST00000417666 2714 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VAMP1P23763 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.03□□□□□ -0.16
VAMP1P23763 AC122714.2-201ENST00000502787 707 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 NAPSB-206ENST00000562112 1266 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.03□□□□□ -0.16
VAMP1P23763 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.03□□□□□ -0.16
VAMP1P23763 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.03□□□□□ -0.16
VAMP1P23763 ITM2C-210ENST00000620962 501 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 AC073912.3-201ENST00000624414 853 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VAMP1P23763 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 AP005117.1-202ENST00000581724 1908 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 AC013268.4-201ENST00000637413 2228 ntBASIC14.03□□□□□ -0.16
VAMP1P23763 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms