Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM21P19474 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 AC007950.2-201ENST00000615045 2347 ntBASIC18.31■□□□□ 0.52
TRIM21P19474 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM21P19474 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM21P19474 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.31■□□□□ 0.52
TRIM21P19474 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM21P19474 MIR7706-201ENST00000613747 67 ntBASIC18.31■□□□□ 0.52
TRIM21P19474 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM21P19474 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM21P19474 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM21P19474 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM21P19474 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM21P19474 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 MTHFR-217ENST00000641820 1569 ntBASIC18.3■□□□□ 0.52
TRIM21P19474 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM21P19474 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 ELK2BP-201ENST00000415014 1224 ntBASIC18.3■□□□□ 0.52
TRIM21P19474 AL590627.1-203ENST00000421194 1026 ntBASIC18.3■□□□□ 0.52
TRIM21P19474 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM21P19474 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 RPS15P9-201ENST00000494093 319 ntBASIC18.3■□□□□ 0.52
TRIM21P19474 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 AC022188.1-201ENST00000620960 1664 ntBASIC18.3■□□□□ 0.52
TRIM21P19474 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM21P19474 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM21P19474 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM21P19474 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM21P19474 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM21P19474 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 PAUPAR-201ENST00000630360 2965 ntBASIC18.29■□□□□ 0.52
TRIM21P19474 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM21P19474 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 AC116407.3-201ENST00000623905 1129 ntBASIC18.29■□□□□ 0.52
TRIM21P19474 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM21P19474 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM21P19474 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM21P19474 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM21P19474 PI4KAP1-204ENST00000612579 1703 ntBASIC18.29■□□□□ 0.52
TRIM21P19474 TOP3BP1-201ENST00000420768 1380 ntBASIC18.29■□□□□ 0.52
TRIM21P19474 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms