Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTSBP07858 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CTSBP07858 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
CTSBP07858 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.61■□□□□ 0.09
CTSBP07858 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CTSBP07858 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 AL589702.1-201ENST00000641229 1509 ntBASIC15.6■□□□□ 0.09
CTSBP07858 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.6■□□□□ 0.09
CTSBP07858 AC107890.1-201ENST00000422478 521 ntBASIC15.6■□□□□ 0.09
CTSBP07858 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CTSBP07858 AC098859.1-201ENST00000502915 1238 ntBASIC15.6■□□□□ 0.09
CTSBP07858 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.6■□□□□ 0.09
CTSBP07858 BANF1P1-201ENST00000553684 263 ntBASIC15.6■□□□□ 0.09
CTSBP07858 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.6■□□□□ 0.09
CTSBP07858 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 AL662844.4-201ENST00000606367 2838 ntBASIC15.6■□□□□ 0.09
CTSBP07858 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CTSBP07858 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CTSBP07858 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.6■□□□□ 0.09
CTSBP07858 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.6■□□□□ 0.09
CTSBP07858 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CTSBP07858 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.59■□□□□ 0.09
CTSBP07858 SPDYE7P-202ENST00000420373 878 ntBASIC15.59■□□□□ 0.09
CTSBP07858 AC092580.3-201ENST00000430932 139 ntBASIC15.59■□□□□ 0.09
CTSBP07858 AC055876.3-201ENST00000431496 288 ntBASIC15.59■□□□□ 0.09
CTSBP07858 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.59■□□□□ 0.09
CTSBP07858 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 RNA5SP410-201ENST00000516285 106 ntBASIC15.59■□□□□ 0.09
CTSBP07858 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.59■□□□□ 0.09
CTSBP07858 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.59■□□□□ 0.09
CTSBP07858 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 AC138649.4-201ENST00000612222 287 ntBASIC15.59■□□□□ 0.09
CTSBP07858 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CTSBP07858 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSBP07858 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.59■□□□□ 0.09
CTSBP07858 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSBP07858 PCDHA14-201ENST00000506751 2298 ntBASIC15.59■□□□□ 0.09
CTSBP07858 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CTSBP07858 PCDH8P1-201ENST00000428983 2773 ntBASIC15.58■□□□□ 0.09
CTSBP07858 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CTSBP07858 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.58■□□□□ 0.09
CTSBP07858 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTSBP07858 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CTSBP07858 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CTSBP07858 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CTSBP07858 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTSBP07858 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSBP07858 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms