Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TPM3P06753 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TPM3P06753 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 KRT8P26-201ENST00000534154 1276 ntBASIC18.62■□□□□ 0.57
TPM3P06753 DUX4L17-201ENST00000557360 1267 ntBASIC18.62■□□□□ 0.57
TPM3P06753 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.62■□□□□ 0.57
TPM3P06753 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 AC097493.4-201ENST00000641197 219 ntBASIC18.62■□□□□ 0.57
TPM3P06753 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 KRT8P49-201ENST00000604166 1432 ntBASIC18.62■□□□□ 0.57
TPM3P06753 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TPM3P06753 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TPM3P06753 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TPM3P06753 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 AC005521.1-201ENST00000393351 872 ntBASIC18.61■□□□□ 0.57
TPM3P06753 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 AL020989.1-201ENST00000422979 469 ntBASIC18.61■□□□□ 0.57
TPM3P06753 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.61■□□□□ 0.57
TPM3P06753 AL671277.2-201ENST00000458060 996 ntBASIC18.61■□□□□ 0.57
TPM3P06753 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
TPM3P06753 LINC01238-205ENST00000567549 1107 ntBASIC18.61■□□□□ 0.57
TPM3P06753 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.61■□□□□ 0.57
TPM3P06753 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.61■□□□□ 0.57
TPM3P06753 AC013467.2-201ENST00000605472 835 ntBASIC18.61■□□□□ 0.57
TPM3P06753 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TPM3P06753 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TPM3P06753 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM3P06753 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TPM3P06753 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 GGT3P-204ENST00000453783 1664 ntBASIC18.6■□□□□ 0.57
TPM3P06753 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.6■□□□□ 0.57
TPM3P06753 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.6■□□□□ 0.57
TPM3P06753 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.6■□□□□ 0.57
TPM3P06753 AP002414.1-201ENST00000391405 1147 ntBASIC18.6■□□□□ 0.57
TPM3P06753 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.6■□□□□ 0.57
TPM3P06753 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.6■□□□□ 0.57
TPM3P06753 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.6■□□□□ 0.57
TPM3P06753 AC012306.2-201ENST00000609350 630 ntBASIC18.6■□□□□ 0.57
TPM3P06753 AC006011.2-201ENST00000621313 1158 ntBASIC18.6■□□□□ 0.57
TPM3P06753 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPM3P06753 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms