Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RB1P06400 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RB1P06400 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RB1P06400 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RB1P06400 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.36■□□□□ 0.37
RB1P06400 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.35■□□□□ 0.37
RB1P06400 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RB1P06400 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RB1P06400 TMEM14DP-201ENST00000422205 345 ntBASIC17.35■□□□□ 0.37
RB1P06400 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 AC104596.2-201ENST00000512793 793 ntBASIC17.35■□□□□ 0.37
RB1P06400 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.35■□□□□ 0.37
RB1P06400 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 RARRES2P5-201ENST00000564013 466 ntBASIC17.35■□□□□ 0.37
RB1P06400 AL606495.2-201ENST00000605867 535 ntBASIC17.35■□□□□ 0.37
RB1P06400 MIR8072-201ENST00000614241 80 ntBASIC17.35■□□□□ 0.37
RB1P06400 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RB1P06400 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RB1P06400 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
RB1P06400 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RB1P06400 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RB1P06400 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.35■□□□□ 0.37
RB1P06400 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RB1P06400 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 FO393414.2-201ENST00000405153 598 ntBASIC17.34■□□□□ 0.37
RB1P06400 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.34■□□□□ 0.37
RB1P06400 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RB1P06400 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.34■□□□□ 0.37
RB1P06400 AP002490.2-201ENST00000524791 560 ntBASIC17.34■□□□□ 0.37
RB1P06400 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.34■□□□□ 0.37
RB1P06400 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
RB1P06400 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.34■□□□□ 0.37
RB1P06400 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RB1P06400 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.34■□□□□ 0.37
RB1P06400 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.34■□□□□ 0.37
RB1P06400 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.34■□□□□ 0.37
RB1P06400 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.34■□□□□ 0.37
RB1P06400 AC008735.3-201ENST00000596646 500 ntBASIC17.34■□□□□ 0.37
RB1P06400 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.34■□□□□ 0.37
RB1P06400 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RB1P06400 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RB1P06400 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.33■□□□□ 0.37
RB1P06400 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.33■□□□□ 0.37
RB1P06400 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RB1P06400 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RB1P06400 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.33■□□□□ 0.36
RB1P06400 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.33■□□□□ 0.36
RB1P06400 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RB1P06400 KRT43P-201ENST00000434019 910 ntBASIC17.33■□□□□ 0.36
RB1P06400 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.33■□□□□ 0.36
RB1P06400 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 AC104989.1-201ENST00000519711 778 ntBASIC17.33■□□□□ 0.36
RB1P06400 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.33■□□□□ 0.36
RB1P06400 FAM8A2P-201ENST00000528813 1142 ntBASIC17.33■□□□□ 0.36
RB1P06400 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.33■□□□□ 0.36
RB1P06400 MIR4525-201ENST00000580000 75 ntBASIC17.33■□□□□ 0.36
RB1P06400 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.33■□□□□ 0.36
RB1P06400 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RB1P06400 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms