Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.05■□□□□ 0
HMGN1P05114 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HMGN1P05114 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.05■□□□□ 0
HMGN1P05114 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HMGN1P05114 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HMGN1P05114 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.05■□□□□ -0
HMGN1P05114 KRT16P4-201ENST00000453883 522 ntBASIC15.05■□□□□ -0
HMGN1P05114 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.05■□□□□ -0
HMGN1P05114 BX005266.1-201ENST00000473402 457 ntBASIC15.05■□□□□ -0
HMGN1P05114 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.05■□□□□ -0
HMGN1P05114 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.05■□□□□ -0
HMGN1P05114 AL139424.1-201ENST00000607572 797 ntBASIC15.05■□□□□ -0
HMGN1P05114 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 AL589182.2-201ENST00000619332 1049 ntBASIC15.05■□□□□ -0
HMGN1P05114 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 AF228730.7-201ENST00000641842 219 ntBASIC15.05■□□□□ -0
HMGN1P05114 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.05■□□□□ -0
HMGN1P05114 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.05■□□□□ -0
HMGN1P05114 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HMGN1P05114 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGN1P05114 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.04■□□□□ -0
HMGN1P05114 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 PCGF3-213ENST00000620529 1899 ntBASIC15.04■□□□□ -0
HMGN1P05114 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.04■□□□□ -0
HMGN1P05114 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 NUS1P2-201ENST00000417358 873 ntBASIC15.04■□□□□ -0
HMGN1P05114 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.04■□□□□ -0
HMGN1P05114 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.04■□□□□ -0
HMGN1P05114 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.04■□□□□ -0
HMGN1P05114 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.04■□□□□ -0
HMGN1P05114 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
HMGN1P05114 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGN1P05114 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGN1P05114 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.03■□□□□ -0
HMGN1P05114 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.03■□□□□ -0
HMGN1P05114 GPAA1P2-202ENST00000606848 1787 ntBASIC15.03■□□□□ -0
HMGN1P05114 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HMGN1P05114 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 AC131009.4-201ENST00000624048 1740 ntBASIC15.03■□□□□ -0
HMGN1P05114 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
HMGN1P05114 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HMGN1P05114 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.03■□□□□ -0
HMGN1P05114 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGN1P05114 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms