Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.94□□□□□ -0.18
CD74P04233 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.94□□□□□ -0.18
CD74P04233 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.94□□□□□ -0.18
CD74P04233 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.94□□□□□ -0.18
CD74P04233 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 AL109954.1-202ENST00000564051 2148 ntBASIC13.94□□□□□ -0.18
CD74P04233 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.94□□□□□ -0.18
CD74P04233 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 AC136621.1-201ENST00000624017 2304 ntBASIC13.93□□□□□ -0.18
CD74P04233 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.93□□□□□ -0.18
CD74P04233 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 RNF152P1-201ENST00000397754 604 ntBASIC13.93□□□□□ -0.18
CD74P04233 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.93□□□□□ -0.18
CD74P04233 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 AL645929.1-201ENST00000420084 975 ntBASIC13.93□□□□□ -0.18
CD74P04233 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.93□□□□□ -0.18
CD74P04233 AC091607.1-201ENST00000490318 1060 ntBASIC13.93□□□□□ -0.18
CD74P04233 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.93□□□□□ -0.18
CD74P04233 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 AL353135.1-201ENST00000606729 504 ntBASIC13.93□□□□□ -0.18
CD74P04233 AC083849.1-201ENST00000615227 514 ntBASIC13.93□□□□□ -0.18
CD74P04233 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 AL009178.2-201ENST00000597278 2719 ntBASIC13.93□□□□□ -0.18
CD74P04233 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD74P04233 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD74P04233 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD74P04233 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.92□□□□□ -0.18
CD74P04233 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms