Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APOA1P02647 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.81□□□□□ -0.04
APOA1P02647 AC004263.2-201ENST00000617183 678 ntBASIC14.81□□□□□ -0.04
APOA1P02647 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 AC097374.2-201ENST00000618617 1306 ntBASIC14.81□□□□□ -0.04
APOA1P02647 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 AC023908.3-201ENST00000564211 3047 ntBASIC14.81□□□□□ -0.04
APOA1P02647 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
APOA1P02647 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
APOA1P02647 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 ABHD17AP1-201ENST00000358206 933 ntBASIC14.8□□□□□ -0.04
APOA1P02647 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 RPS2P55-201ENST00000397318 883 ntBASIC14.8□□□□□ -0.04
APOA1P02647 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA1P02647 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA1P02647 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA1P02647 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA1P02647 AP001412.1-201ENST00000608405 714 ntBASIC14.8□□□□□ -0.04
APOA1P02647 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
APOA1P02647 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.8□□□□□ -0.04
APOA1P02647 AC139749.1-202ENST00000617529 3139 ntBASIC14.8□□□□□ -0.04
APOA1P02647 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
APOA1P02647 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA1P02647 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA1P02647 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA1P02647 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
APOA1P02647 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOA1P02647 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms