Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.92□□□□□ -0.02
SPTA1P02549 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SPTA1P02549 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 IGHJ2P-201ENST00000454480 60 ntBASIC14.91□□□□□ -0.02
SPTA1P02549 SPDYE18-201ENST00000510091 1050 ntBASIC14.91□□□□□ -0.02
SPTA1P02549 ZNF767P-206ENST00000513792 565 ntBASIC14.91□□□□□ -0.02
SPTA1P02549 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.91□□□□□ -0.02
SPTA1P02549 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.91□□□□□ -0.02
SPTA1P02549 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.91□□□□□ -0.02
SPTA1P02549 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SPTA1P02549 AL671710.1-201ENST00000610245 2349 ntBASIC14.91□□□□□ -0.02
SPTA1P02549 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SPTA1P02549 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPTA1P02549 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.91□□□□□ -0.02
SPTA1P02549 NUS1P3-201ENST00000423502 862 ntBASIC14.91□□□□□ -0.02
SPTA1P02549 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.91□□□□□ -0.02
SPTA1P02549 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.91□□□□□ -0.02
SPTA1P02549 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SPTA1P02549 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.91□□□□□ -0.02
SPTA1P02549 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.91□□□□□ -0.02
SPTA1P02549 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.91□□□□□ -0.02
SPTA1P02549 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.9□□□□□ -0.02
SPTA1P02549 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 CALR4P-201ENST00000431943 946 ntBASIC14.9□□□□□ -0.02
SPTA1P02549 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 AC123567.1-201ENST00000548294 1261 ntBASIC14.9□□□□□ -0.02
SPTA1P02549 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SPTA1P02549 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 BRWD1P1-201ENST00000401091 371 ntBASIC14.9□□□□□ -0.02
SPTA1P02549 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPTA1P02549 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.9□□□□□ -0.02
SPTA1P02549 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.9□□□□□ -0.02
SPTA1P02549 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.9□□□□□ -0.02
SPTA1P02549 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SPTA1P02549 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms