Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 SPDYE11-202ENST00000450699 704 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 AC079140.1-201ENST00000508039 487 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 FAM86C2P-203ENST00000528684 1004 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.97■□□□□ 0.31
MT-CO1P00395 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-CO1P00395 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 SPDYE9P-201ENST00000570642 692 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 SPDYE10P-202ENST00000612005 668 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 SPDYE8P-202ENST00000612377 668 ntBASIC16.97■□□□□ 0.31
MT-CO1P00395 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
MT-CO1P00395 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-CO1P00395 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-CO1P00395 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MT-CO1P00395 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.96■□□□□ 0.31
MT-CO1P00395 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.96■□□□□ 0.31
MT-CO1P00395 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 AC093520.2-201ENST00000561830 333 ntBASIC16.96■□□□□ 0.31
MT-CO1P00395 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-CO1P00395 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MT-CO1P00395 AC016027.1-202ENST00000607927 1699 ntBASIC16.96■□□□□ 0.31
MT-CO1P00395 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.96■□□□□ 0.31
MT-CO1P00395 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
MT-CO1P00395 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-CO1P00395 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-CO1P00395 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.96■□□□□ 0.3
MT-CO1P00395 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-CO1P00395 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-CO1P00395 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.3
MT-CO1P00395 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-CO1P00395 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.96■□□□□ 0.3
MT-CO1P00395 WASH6P-202ENST00000359512 1437 ntBASIC16.96■□□□□ 0.3
MT-CO1P00395 KRT8P39-201ENST00000396270 1433 ntBASIC16.96■□□□□ 0.3
MT-CO1P00395 AKAP8P1-201ENST00000434743 1349 ntBASIC16.96■□□□□ 0.3
MT-CO1P00395 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MT-CO1P00395 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-CO1P00395 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MT-CO1P00395 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MT-CO1P00395 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms