Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CNOT4O95628 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.73□□□□□ -0.05
CNOT4O95628 AL355306.1-201ENST00000415580 579 ntBASIC14.73□□□□□ -0.05
CNOT4O95628 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.73□□□□□ -0.05
CNOT4O95628 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.73□□□□□ -0.05
CNOT4O95628 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.73□□□□□ -0.05
CNOT4O95628 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CNOT4O95628 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 AC099522.2-201ENST00000607001 744 ntBASIC14.73□□□□□ -0.05
CNOT4O95628 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CNOT4O95628 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CNOT4O95628 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
CNOT4O95628 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CNOT4O95628 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CNOT4O95628 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.72□□□□□ -0.05
CNOT4O95628 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CNOT4O95628 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 AC092068.3-201ENST00000587894 2016 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
CNOT4O95628 AL671277.1-201ENST00000429656 993 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 ADH5P3-201ENST00000433842 1137 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.72□□□□□ -0.05
CNOT4O95628 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.72□□□□□ -0.05
CNOT4O95628 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.72□□□□□ -0.05
CNOT4O95628 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 AC026120.1-201ENST00000611536 926 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.72□□□□□ -0.05
CNOT4O95628 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CNOT4O95628 WASH6P-202ENST00000359512 1437 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 KRT8P39-201ENST00000396270 1433 ntBASIC14.72□□□□□ -0.05
CNOT4O95628 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.72□□□□□ -0.05
CNOT4O95628 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CNOT4O95628 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNOT4O95628 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CNOT4O95628 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms