Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
RFPL1O75677 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RFPL1O75677 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.63■□□□□ 0.25
RFPL1O75677 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 AC098831.1-202ENST00000438821 336 ntBASIC16.63■□□□□ 0.25
RFPL1O75677 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.63■□□□□ 0.25
RFPL1O75677 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.63■□□□□ 0.25
RFPL1O75677 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RFPL1O75677 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFPL1O75677 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 REXO1L8P-201ENST00000604378 1897 ntBASIC16.63■□□□□ 0.25
RFPL1O75677 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFPL1O75677 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.62■□□□□ 0.25
RFPL1O75677 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
RFPL1O75677 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RFPL1O75677 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 PGAM5P1-201ENST00000518923 814 ntBASIC16.62■□□□□ 0.25
RFPL1O75677 AC104640.1-201ENST00000562617 2109 ntBASIC16.62■□□□□ 0.25
RFPL1O75677 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 AL356488.2-201ENST00000602755 427 ntBASIC16.62■□□□□ 0.25
RFPL1O75677 AL589182.2-201ENST00000619332 1049 ntBASIC16.62■□□□□ 0.25
RFPL1O75677 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.62■□□□□ 0.25
RFPL1O75677 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.62■□□□□ 0.25
RFPL1O75677 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFPL1O75677 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFPL1O75677 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFPL1O75677 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 GPAA1P2-202ENST00000606848 1787 ntBASIC16.61■□□□□ 0.25
RFPL1O75677 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
RFPL1O75677 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 AC087163.2-201ENST00000457299 853 ntBASIC16.61■□□□□ 0.25
RFPL1O75677 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.61■□□□□ 0.25
RFPL1O75677 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RFPL1O75677 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.61■□□□□ 0.25
RFPL1O75677 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 Z83851.2-201ENST00000609564 659 ntBASIC16.61■□□□□ 0.25
RFPL1O75677 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFPL1O75677 SLC22A20-204ENST00000530038 1673 ntBASIC16.61■□□□□ 0.25
RFPL1O75677 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFPL1O75677 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.61■□□□□ 0.25
RFPL1O75677 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFPL1O75677 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms