Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM3O75382 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRIM3O75382 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM3O75382 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRIM3O75382 UPF3AP3-201ENST00000420996 769 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM3O75382 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM3O75382 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
TRIM3O75382 DUX4L17-201ENST00000557360 1267 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 PDPK2P-202ENST00000562415 1191 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 AC006538.3-201ENST00000612495 578 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 AC068587.6-202ENST00000641839 5619 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRIM3O75382 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 AC025580.3-201ENST00000617932 1424 ntBASIC15.48■□□□□ 0.07
TRIM3O75382 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
TRIM3O75382 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRIM3O75382 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 RPSAP43-201ENST00000402237 625 ntBASIC15.47■□□□□ 0.07
TRIM3O75382 GPX1P2-201ENST00000429271 606 ntBASIC15.47■□□□□ 0.07
TRIM3O75382 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM3O75382 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.47■□□□□ 0.07
TRIM3O75382 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRIM3O75382 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 LINC00554-201ENST00000564841 3011 ntBASIC15.47■□□□□ 0.07
TRIM3O75382 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 AC068418.2-201ENST00000577309 3703 ntBASIC15.47■□□□□ 0.07
TRIM3O75382 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM3O75382 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
TRIM3O75382 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM3O75382 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM3O75382 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms