Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PRAMEF4O60810 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.89■□□□□ 0.13
PRAMEF4O60810 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PRAMEF4O60810 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF4O60810 AC016027.1-202ENST00000607927 1699 ntBASIC15.89■□□□□ 0.13
PRAMEF4O60810 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AC024909.3-201ENST00000611513 2257 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 MIR574-201ENST00000385209 96 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AC023274.1-201ENST00000418278 595 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AP000347.1-202ENST00000435868 847 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 AL591424.1-201ENST00000442569 1213 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 AC074386.1-202ENST00000463561 864 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 PGAM5P1-201ENST00000518923 814 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AC099522.2-201ENST00000607001 744 ntBASIC15.88■□□□□ 0.13
PRAMEF4O60810 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms