Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRKNO60260 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.4■□□□□ 0.06
PRKNO60260 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.4■□□□□ 0.06
PRKNO60260 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.4■□□□□ 0.06
PRKNO60260 AC006538.1-201ENST00000567905 1585 ntBASIC15.4■□□□□ 0.06
PRKNO60260 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.4■□□□□ 0.06
PRKNO60260 AKAP8P1-201ENST00000434743 1349 ntBASIC15.4■□□□□ 0.06
PRKNO60260 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.4■□□□□ 0.06
PRKNO60260 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 GGT4P-201ENST00000623672 1708 ntBASIC15.4■□□□□ 0.06
PRKNO60260 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.4■□□□□ 0.06
PRKNO60260 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKNO60260 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
PRKNO60260 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRKNO60260 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRKNO60260 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.39■□□□□ 0.05
PRKNO60260 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.39■□□□□ 0.05
PRKNO60260 AL138918.1-201ENST00000568306 659 ntBASIC15.39■□□□□ 0.05
PRKNO60260 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 AC004835.2-201ENST00000603762 682 ntBASIC15.39■□□□□ 0.05
PRKNO60260 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 AL139011.1-202ENST00000642063 584 ntBASIC15.39■□□□□ 0.05
PRKNO60260 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRKNO60260 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKNO60260 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKNO60260 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKNO60260 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.38■□□□□ 0.05
PRKNO60260 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKNO60260 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKNO60260 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKNO60260 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.38■□□□□ 0.05
PRKNO60260 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 AL592309.1-201ENST00000443127 649 ntBASIC15.38■□□□□ 0.05
PRKNO60260 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKNO60260 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKNO60260 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKNO60260 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKNO60260 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms