Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.34■□□□□ 0.37
MCF2LO15068 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MCF2LO15068 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.34■□□□□ 0.37
MCF2LO15068 AC096734.2-201ENST00000562054 433 ntBASIC17.34■□□□□ 0.37
MCF2LO15068 MPDU1-223ENST00000582151 728 ntBASIC17.34■□□□□ 0.37
MCF2LO15068 MTDHP5-201ENST00000598980 586 ntBASIC17.34■□□□□ 0.37
MCF2LO15068 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.34■□□□□ 0.37
MCF2LO15068 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.34■□□□□ 0.37
MCF2LO15068 AC008894.3-201ENST00000624324 3103 ntBASIC17.34■□□□□ 0.37
MCF2LO15068 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MCF2LO15068 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.34■□□□□ 0.37
MCF2LO15068 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 ME2P1-201ENST00000426028 1970 ntBASIC17.33■□□□□ 0.37
MCF2LO15068 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.33■□□□□ 0.37
MCF2LO15068 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MCF2LO15068 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MCF2LO15068 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 RPSAP43-201ENST00000402237 625 ntBASIC17.33■□□□□ 0.36
MCF2LO15068 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 AC018845.2-201ENST00000568326 409 ntBASIC17.33■□□□□ 0.36
MCF2LO15068 AC091167.2-201ENST00000579581 588 ntBASIC17.33■□□□□ 0.36
MCF2LO15068 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.33■□□□□ 0.36
MCF2LO15068 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MCF2LO15068 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MCF2LO15068 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.33■□□□□ 0.36
MCF2LO15068 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.32■□□□□ 0.36
MCF2LO15068 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
MCF2LO15068 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.32■□□□□ 0.36
MCF2LO15068 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
MCF2LO15068 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 AC026691.1-201ENST00000602502 2017 ntBASIC17.32■□□□□ 0.36
MCF2LO15068 MCCD1P2-201ENST00000423228 335 ntBASIC17.32■□□□□ 0.36
MCF2LO15068 GPX1P2-201ENST00000429271 606 ntBASIC17.32■□□□□ 0.36
MCF2LO15068 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 RHOQP3-201ENST00000437982 621 ntBASIC17.32■□□□□ 0.36
MCF2LO15068 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.32■□□□□ 0.36
MCF2LO15068 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 REXO1L3P-201ENST00000622202 1288 ntBASIC17.32■□□□□ 0.36
MCF2LO15068 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.32■□□□□ 0.36
MCF2LO15068 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MCF2LO15068 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MCF2LO15068 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.32■□□□□ 0.36
MCF2LO15068 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
MCF2LO15068 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MCF2LO15068 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCF2LO15068 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms