Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC188H7C350 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 AL589182.2-201ENST00000619332 1049 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 AC116407.4-201ENST00000623319 1061 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 PGM5P2-202ENST00000637225 1043 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC188H7C350 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC188H7C350 AC013268.4-201ENST00000637413 2228 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 AC016027.1-202ENST00000607927 1699 ntBASIC17.23■□□□□ 0.35
CCDC188H7C350 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC188H7C350 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC188H7C350 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC188H7C350 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC188H7C350 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC188H7C350 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC188H7C350 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC188H7C350 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC188H7C350 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC188H7C350 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC188H7C350 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC188H7C350 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC188H7C350 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC188H7C350 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC188H7C350 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC188H7C350 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 SLC22A20-204ENST00000530038 1673 ntBASIC17.23■□□□□ 0.35
CCDC188H7C350 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC188H7C350 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC188H7C350 PMS2P1-201ENST00000431037 1228 ntBASIC17.22■□□□□ 0.35
CCDC188H7C350 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC188H7C350 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 AC012615.1-201ENST00000565797 1299 ntBASIC17.22■□□□□ 0.35
CCDC188H7C350 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 AL353732.1-201ENST00000569618 1459 ntBASIC17.22■□□□□ 0.35
CCDC188H7C350 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC188H7C350 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC188H7C350 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC188H7C350 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CCDC188H7C350 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC188H7C350 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CCDC188H7C350 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC188H7C350 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 AC099063.4-201ENST00000641099 1602 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms