Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 HNRNPUP1-201ENST00000554987 333 ntBASIC20.48■□□□□ 0.87
RGPD3A6NKT7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RGPD3A6NKT7 AC012317.2-201ENST00000623305 2251 ntBASIC20.47■□□□□ 0.87
RGPD3A6NKT7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 FTLP1-201ENST00000449155 526 ntBASIC20.47■□□□□ 0.87
RGPD3A6NKT7 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 MIR5572-201ENST00000583188 137 ntBASIC20.47■□□□□ 0.87
RGPD3A6NKT7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 AL354751.1-201ENST00000412768 1863 ntBASIC20.47■□□□□ 0.87
RGPD3A6NKT7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RGPD3A6NKT7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC098818.2-201ENST00000564925 2320 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 LINC02012-201ENST00000608206 1725 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC091046.1-201ENST00000331871 207 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AL355334.1-201ENST00000417713 215 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AL590640.2-201ENST00000457038 527 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 MIR4741-201ENST00000579822 90 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC026740.1-201ENST00000607068 791 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AC138649.2-201ENST00000615886 705 ntBASIC20.46■□□□□ 0.87
RGPD3A6NKT7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.46■□□□□ 0.87
RGPD3A6NKT7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.45■□□□□ 0.86
RGPD3A6NKT7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 AC007274.2-201ENST00000421675 662 ntBASIC20.45■□□□□ 0.86
RGPD3A6NKT7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RGPD3A6NKT7 KRT18P64-201ENST00000434946 1219 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms