Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 AC131009.4-201ENST00000624048 1740 ntBASIC14.84□□□□□ -0.03
TVP23AA6NH52 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 SAPCD2P3-201ENST00000455031 850 ntBASIC14.84□□□□□ -0.03
TVP23AA6NH52 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 LINC01711-201ENST00000598340 967 ntBASIC14.84□□□□□ -0.03
TVP23AA6NH52 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 AF228730.7-201ENST00000641842 219 ntBASIC14.84□□□□□ -0.03
TVP23AA6NH52 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.84□□□□□ -0.03
TVP23AA6NH52 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TVP23AA6NH52 KRT8P39-201ENST00000396270 1433 ntBASIC14.83□□□□□ -0.03
TVP23AA6NH52 GGT4P-201ENST00000623672 1708 ntBASIC14.83□□□□□ -0.03
TVP23AA6NH52 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TVP23AA6NH52 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.83□□□□□ -0.03
TVP23AA6NH52 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 MTHFR-217ENST00000641820 1569 ntBASIC14.83□□□□□ -0.04
TVP23AA6NH52 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.83□□□□□ -0.04
TVP23AA6NH52 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 AL805961.1-202ENST00000641562 540 ntBASIC14.83□□□□□ -0.04
TVP23AA6NH52 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 SLC22A20-204ENST00000530038 1673 ntBASIC14.83□□□□□ -0.04
TVP23AA6NH52 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TVP23AA6NH52 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.83□□□□□ -0.04
TVP23AA6NH52 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.82□□□□□ -0.04
TVP23AA6NH52 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TVP23AA6NH52 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.82□□□□□ -0.04
TVP23AA6NH52 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TVP23AA6NH52 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TVP23AA6NH52 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms