Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AP003680.1-201ENST00000598970 3660 ntBASIC17.59■□□□□ 0.41
RCCD1A6NED2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 TNRC18P2-201ENST00000417666 2714 ntBASIC17.59■□□□□ 0.41
RCCD1A6NED2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.59■□□□□ 0.41
RCCD1A6NED2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
RCCD1A6NED2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCCD1A6NED2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCCD1A6NED2 AC005622.1-201ENST00000636801 1703 ntBASIC17.58■□□□□ 0.41
RCCD1A6NED2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCCD1A6NED2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCCD1A6NED2 AL592424.1-201ENST00000563624 1536 ntBASIC17.58■□□□□ 0.41
RCCD1A6NED2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCCD1A6NED2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RCCD1A6NED2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCCD1A6NED2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 AC021087.4-201ENST00000563761 564 ntBASIC17.58■□□□□ 0.4
RCCD1A6NED2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 AC008608.2-201ENST00000606089 416 ntBASIC17.58■□□□□ 0.4
RCCD1A6NED2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.58■□□□□ 0.4
RCCD1A6NED2 AC093458.2-201ENST00000623150 629 ntBASIC17.58■□□□□ 0.4
RCCD1A6NED2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RCCD1A6NED2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCCD1A6NED2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 MST1L-201ENST00000442552 2185 ntBASIC17.57■□□□□ 0.4
RCCD1A6NED2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms