Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 TSPY22P-201ENST00000427496 604 ntBASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 MPDU1-223ENST00000582151 728 ntBASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC136621.1-201ENST00000624017 2304 ntBASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AL109954.1-202ENST00000564051 2148 ntBASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 AC092919.2-201ENST00000623631 1645 ntBASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRDV1A0A1B0GX56 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRDV1A0A1B0GX56 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 SPDYE21P-201ENST00000413323 827 ntBASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 SPDYE13P-201ENST00000445314 798 ntBASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 AL590787.1-201ENST00000568856 1315 ntBASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRDV1A0A1B0GX56 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 AP002414.2-201ENST00000591780 3365 ntBASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 AL009178.2-201ENST00000597278 2719 ntBASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.57□□□□□ -0.08
TRDV1A0A1B0GX56 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms