Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL512384.1-201ENST00000406683 331 ntBASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AL512361.1-201ENST00000554200 418 ntBASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 IGHV3-72-202ENST00000621503 303 ntBASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 HILS1-202ENST00000545329 423 ntBASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 AC044860.1-202ENST00000559481 777 ntBASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC187A0A096LP49 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC187A0A096LP49 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC114501.2-201ENST00000439631 535 ntBASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC055876.2-201ENST00000531834 546 ntBASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC187A0A096LP49 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms