Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 SPDYE13P-201ENST00000445314 798 ntBASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 AC148477.5-201ENST00000625164 1645 ntBASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AC013268.4-201ENST00000637413 2228 ntBASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AC087499.1-201ENST00000418141 1075 ntBASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AL020989.1-201ENST00000422979 469 ntBASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 AC007326.2-201ENST00000624224 7579 ntBASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV18A0A075B6X5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms