Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL009178.2-201ENST00000597278 2719 ntBASIC15.71■□□□□ 0.11
AP4S1Q9Y587 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.71■□□□□ 0.11
AP4S1Q9Y587 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 ACTG1P4-201ENST00000425123 1122 ntBASIC15.71■□□□□ 0.11
AP4S1Q9Y587 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 AL031432.5-201ENST00000641059 760 ntBASIC15.71■□□□□ 0.11
AP4S1Q9Y587 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4S1Q9Y587 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4S1Q9Y587 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4S1Q9Y587 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 Z83836.1-201ENST00000624605 1642 ntBASIC15.7■□□□□ 0.1
AP4S1Q9Y587 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 AL359075.1-203ENST00000462729 1002 ntBASIC15.7■□□□□ 0.1
AP4S1Q9Y587 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 TCAF2P1-201ENST00000291129 2421 ntBASIC15.7■□□□□ 0.1
AP4S1Q9Y587 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 AL512652.2-201ENST00000625156 1716 ntBASIC15.7■□□□□ 0.1
AP4S1Q9Y587 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 AC016027.1-202ENST00000607927 1699 ntBASIC15.7■□□□□ 0.1
AP4S1Q9Y587 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP4S1Q9Y587 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 KRT17P2-201ENST00000300992 1314 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AL031731.1-201ENST00000642131 2094 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AC069224.1-201ENST00000566372 1715 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms