Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 U1.21-201ENST00000580816 167 ntBASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS9D1Q9Y2B5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 RN7SL440P-201ENST00000577855 343 ntBASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AL031055.1-201ENST00000606362 631 ntBASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS9D1Q9Y2B5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 HMGA1P7-201ENST00000406908 502 ntBASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 RHOQP3-201ENST00000437982 621 ntBASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 AC009078.2-202ENST00000463353 338 ntBASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 PKD1P5-201ENST00000532415 10291 ntBASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 AC145285.3-201ENST00000564603 959 ntBASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS9D1Q9Y2B5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS9D1Q9Y2B5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms