Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LHX6Q9UPM6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 BRWD1P1-201ENST00000401091 371 ntBASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 ACTG1P4-201ENST00000425123 1122 ntBASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 GNAQP1-201ENST00000444815 1067 ntBASIC15.73■□□□□ 0.11
LHX6Q9UPM6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC009407.1-201ENST00000568958 598 ntBASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 FGA-203ENST00000622532 1130 ntTSL 5 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LHX6Q9UPM6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 MIR1908-201ENST00000410394 80 ntBASIC15.72■□□□□ 0.11
LHX6Q9UPM6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 HLA-V-204ENST00000476601 1289 ntBASIC15.72■□□□□ 0.11
LHX6Q9UPM6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AC133552.4-201ENST00000576103 676 ntBASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AC115989.2-201ENST00000578640 563 ntBASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ABALON-201ENST00000629058 1903 ntBASIC15.72■□□□□ 0.11
LHX6Q9UPM6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LHX6Q9UPM6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.71■□□□□ 0.11
LHX6Q9UPM6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms