Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC107890.1-201ENST00000422478 521 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 DUX4L27-201ENST00000554796 1261 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 RARRES2P9-201ENST00000565168 469 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC011467.4-201ENST00000594891 528 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AL390955.2-201ENST00000603032 514 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC020765.3-201ENST00000613051 740 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AL603756.1-201ENST00000606511 2163 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AC005915.1-201ENST00000624912 2018 ntBASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC006538.1-201ENST00000567905 1585 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC105020.1-201ENST00000435356 2205 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AL031731.1-201ENST00000642131 2094 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 HLA-H-201ENST00000383620 1096 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 SPCS2P1-201ENST00000561636 679 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC140878.1-201ENST00000565277 250 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 GPAA1P2-202ENST00000606848 1787 ntBASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCF1Q9UBD9 AP3S2-216ENST00000617003 1561 ntBASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 SPTSSB-204ENST00000617024 1292 ntBASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 GGT4P-201ENST00000623672 1708 ntBASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCF1Q9UBD9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms