Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC244093.1-201ENST00000610837 814 ntBASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 MIR1247-201ENST00000408206 136 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 AC009542.2-202ENST00000619004 1067 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 RPL13P2-201ENST00000440687 659 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 KLF2P4-201ENST00000451959 1225 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 RN7SL399P-201ENST00000471648 279 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 RNA5SP412-201ENST00000516234 123 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 AL049840.4-201ENST00000602422 811 ntBASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.69■■□□□ 1.06
PHRF1Q9P1Y6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 HLA-A-202ENST00000376806 1854 ntBASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 FO393414.2-201ENST00000405153 598 ntBASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 RN7SL219P-201ENST00000582872 296 ntBASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 AC068587.10-201ENST00000641210 219 ntBASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHRF1Q9P1Y6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 AC074338.1-201ENST00000416825 156 ntBASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 AC106760.1-201ENST00000508690 800 ntBASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.67■■□□□ 1.06
PHRF1Q9P1Y6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.66■■□□□ 1.06
PHRF1Q9P1Y6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.66■■□□□ 1.06
PHRF1Q9P1Y6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHRF1Q9P1Y6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHRF1Q9P1Y6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms