Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 AC006449.5-201ENST00000610658 2098 ntBASIC17.62■□□□□ 0.41
CISHQ9NSE2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 CEND1P1-201ENST00000451006 455 ntBASIC17.62■□□□□ 0.41
CISHQ9NSE2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 POU5F1P6-201ENST00000466990 990 ntBASIC17.62■□□□□ 0.41
CISHQ9NSE2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 MIR4469-201ENST00000583919 79 ntBASIC17.62■□□□□ 0.41
CISHQ9NSE2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CISHQ9NSE2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC005622.1-201ENST00000636801 1703 ntBASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC073439.1-201ENST00000624121 1774 ntBASIC17.61■□□□□ 0.41
CISHQ9NSE2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 KRT8P48-201ENST00000515599 1220 ntBASIC17.61■□□□□ 0.41
CISHQ9NSE2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC026120.1-201ENST00000611536 926 ntBASIC17.61■□□□□ 0.41
CISHQ9NSE2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CISHQ9NSE2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CISHQ9NSE2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms