Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 PCDHA12-202ENST00000613593 2588 ntBASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.23■□□□□ 0.03
SDHAF3Q9NRP4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 FAM58CP-201ENST00000435741 640 ntBASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 AC092865.5-201ENST00000545435 363 ntBASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 AC078925.2-201ENST00000624013 1973 ntBASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDHAF3Q9NRP4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SDHAF3Q9NRP4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 AL671710.1-201ENST00000610245 2349 ntBASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 SNX33P1-201ENST00000592116 1762 ntBASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SDHAF3Q9NRP4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SDHAF3Q9NRP4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
SDHAF3Q9NRP4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms