Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SPHK2Q9NRA0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC015922.1-201ENST00000421102 1152 ntBASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AL079307.3-201ENST00000556114 283 ntBASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 AC009118.2-201ENST00000613275 655 ntBASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK2Q9NRA0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AC009477.1-201ENST00000452936 217 ntBASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SPHK2Q9NRA0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms