Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 AL118508.1-201ENST00000613502 2345 ntBASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 CEND1P1-201ENST00000451006 455 ntBASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
PRDM9Q9NQV7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC211486.1-202ENST00000416371 468 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC211476.1-201ENST00000503899 468 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC099522.2-201ENST00000607001 744 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC006538.3-201ENST00000612495 578 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC139530.3-201ENST00000620344 690 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.66■□□□□ 0.1
PRDM9Q9NQV7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms