Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.67■□□□□ 0.74
RTN4Q9NQC3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AC024243.1-201ENST00000609234 778 ntBASIC19.67■□□□□ 0.74
RTN4Q9NQC3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 AC022898.2-201ENST00000616822 1312 ntBASIC19.67■□□□□ 0.74
RTN4Q9NQC3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RTN4Q9NQC3 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.66■□□□□ 0.74
RTN4Q9NQC3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 AC015819.3-201ENST00000624305 2674 ntBASIC19.66■□□□□ 0.74
RTN4Q9NQC3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 MIR4785-201ENST00000585005 73 ntBASIC19.66■□□□□ 0.74
RTN4Q9NQC3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4Q9NQC3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 AC046185.3-201ENST00000623228 1824 ntBASIC19.65■□□□□ 0.74
RTN4Q9NQC3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms