Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRMS1Q9HCU9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRMS1Q9HCU9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BRMS1Q9HCU9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.15■□□□□ 0.66
BRMS1Q9HCU9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.15■□□□□ 0.66
BRMS1Q9HCU9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 GGT4P-201ENST00000623672 1708 ntBASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 GPAA1P2-202ENST00000606848 1787 ntBASIC19.14■□□□□ 0.66
BRMS1Q9HCU9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PMS2P4-201ENST00000412466 1052 ntBASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AC020765.3-201ENST00000613051 740 ntBASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AC004877.2-201ENST00000623941 599 ntBASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
BRMS1Q9HCU9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC018845.2-201ENST00000568326 409 ntBASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 FAM197Y3-203ENST00000618346 717 ntBASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRMS1Q9HCU9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BRMS1Q9HCU9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms