Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 RPL13AP25-201ENST00000484130 612 ntBASIC15.11■□□□□ 0.01
CHD8Q9HCK8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AP003392.6-201ENST00000607709 325 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AC116562.4-201ENST00000641316 2276 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 FAM86LP-201ENST00000478302 853 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CTBP2P4-201ENST00000513884 920 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 CLUHP6-201ENST00000580789 941 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD8Q9HCK8 INTS4P2-202ENST00000614726 2019 ntBASIC15.1■□□□□ 0.01
CHD8Q9HCK8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 MIR1202-201ENST00000408529 83 ntBASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AL645939.5-201ENST00000606834 243 ntBASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC073352.2-201ENST00000609385 439 ntBASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC145423.3-201ENST00000615987 467 ntBASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AC009084.3-201ENST00000623356 437 ntBASIC15.09■□□□□ 0.01
CHD8Q9HCK8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
CHD8Q9HCK8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 LINC00304-203ENST00000565008 1864 ntBASIC15.08■□□□□ 0.01
CHD8Q9HCK8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CHD8Q9HCK8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms