Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SH2D4AQ9H788 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 AC002472.2-201ENST00000442739 958 ntBASIC19.23■□□□□ 0.67
SH2D4AQ9H788 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 RNA5SP410-201ENST00000516285 106 ntBASIC19.23■□□□□ 0.67
SH2D4AQ9H788 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 AC190387.1-201ENST00000551683 408 ntBASIC19.23■□□□□ 0.67
SH2D4AQ9H788 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH2D4AQ9H788 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AC084018.2-201ENST00000613093 2607 ntBASIC19.22■□□□□ 0.67
SH2D4AQ9H788 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AC236430.1-201ENST00000402231 743 ntBASIC19.22■□□□□ 0.67
SH2D4AQ9H788 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.22■□□□□ 0.67
SH2D4AQ9H788 SPDYE12P-201ENST00000618416 771 ntBASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 AC100757.3-201ENST00000622361 1406 ntBASIC19.22■□□□□ 0.67
SH2D4AQ9H788 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D4AQ9H788 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 RN7SL204P-201ENST00000582831 262 ntBASIC19.21■□□□□ 0.67
SH2D4AQ9H788 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms