Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIK2Q9H0K1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIK2Q9H0K1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SIK2Q9H0K1 AC016027.1-202ENST00000607927 1699 ntBASIC17.2■□□□□ 0.34
SIK2Q9H0K1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.2■□□□□ 0.34
SIK2Q9H0K1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIK2Q9H0K1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.19■□□□□ 0.34
SIK2Q9H0K1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AL355306.1-201ENST00000415580 579 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC211486.1-202ENST00000416371 468 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 ACTG1P14-201ENST00000446382 1122 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC211476.1-201ENST00000503899 468 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC084018.2-201ENST00000613093 2607 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 GGT4P-201ENST00000623672 1708 ntBASIC17.18■□□□□ 0.34
SIK2Q9H0K1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIK2Q9H0K1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 GPAA1P2-202ENST00000606848 1787 ntBASIC17.17■□□□□ 0.34
SIK2Q9H0K1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.17■□□□□ 0.34
SIK2Q9H0K1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms