Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC079328.2-201ENST00000561241 3354 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 AC005052.1-201ENST00000625181 2492 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 HTR5BP-201ENST00000430851 1154 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 POU5F1P6-201ENST00000466990 990 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 ALG1L5P-201ENST00000482043 771 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
POLR1EQ9GZS1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 AC005829.1-201ENST00000570002 483 ntBASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 MIR3687-2-201ENST00000577708 61 ntBASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 MIR3687-1-201ENST00000614492 61 ntBASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR1EQ9GZS1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 AKAP8P1-201ENST00000434743 1349 ntBASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 AL671277.1-201ENST00000429656 993 ntBASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 RN7SL589P-201ENST00000481268 310 ntBASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR1EQ9GZS1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms