Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 CROCCP4-201ENST00000457096 498 ntBASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 AC073389.1-201ENST00000595595 795 ntBASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
UBE2OQ9C0C9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 BRWD1P1-201ENST00000401091 371 ntBASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 MIR1908-201ENST00000410394 80 ntBASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 RN7SL618P-201ENST00000477850 296 ntBASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 AC244093.1-201ENST00000610837 814 ntBASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2OQ9C0C9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AL391005.1-201ENST00000623953 2435 ntBASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CTBP2P3-201ENST00000585629 1255 ntBASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms