Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AL391256.1-201ENST00000443260 1855 ntBASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AC007389.4-201ENST00000454674 793 ntBASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AL033527.4-201ENST00000641026 673 ntBASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 AP005482.1-201ENST00000563722 1273 ntBASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 COX11-210ENST00000639671 696 ntBASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 AL645728.1-201ENST00000366221 2101 ntBASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 GPAA1P2-202ENST00000606848 1787 ntBASIC19.88■□□□□ 0.77
RTFDC1Q9BY42 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 HIST3H2BA-201ENST00000436555 524 ntBASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 AC092658.1-201ENST00000505836 891 ntBASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 AC025048.3-201ENST00000590609 569 ntBASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 AC074044.1-201ENST00000609673 707 ntBASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 AC005702.4-201ENST00000618393 416 ntBASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTFDC1Q9BY42 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 SNX29P1-201ENST00000548357 1007 ntBASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 AL645608.8-201ENST00000606034 2086 ntBASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms