Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 AC005237.2-201ENST00000434368 219 ntBASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 AC023141.5-201ENST00000458585 616 ntBASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 KRT8P48-201ENST00000515599 1220 ntBASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SSBP3Q9BWW4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 PCDHB17P-201ENST00000539533 2393 ntBASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP3Q9BWW4 AC060834.1-201ENST00000443027 2032 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 LINC00895-201ENST00000629028 1637 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 TSEN15P1-201ENST00000423257 515 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AL592309.1-201ENST00000443127 649 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC079140.1-201ENST00000508039 487 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 IGHV3-62-201ENST00000520057 340 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC027612.4-201ENST00000605371 583 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms