Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBNA1BP2Q99848 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MIR1199-201ENST00000621445 119 ntBASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.74■□□□□ 0.27
EBNA1BP2Q99848 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 AL356488.2-201ENST00000602755 427 ntBASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EBNA1BP2Q99848 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms