Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYSTQ99698 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.28□□□□□ -0.6
LYSTQ99698 AC138627.1-207ENST00000641560 1006 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.28□□□□□ -0.6
LYSTQ99698 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 LINC01451-201ENST00000623792 534 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.28□□□□□ -0.6
LYSTQ99698 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LYSTQ99698 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LYSTQ99698 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 AL031731.1-201ENST00000642131 2094 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.28□□□□□ -0.6
LYSTQ99698 RPL13AP20-201ENST00000459725 609 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.28□□□□□ -0.6
LYSTQ99698 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.28□□□□□ -0.6
LYSTQ99698 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 RN7SL828P-201ENST00000607615 303 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYSTQ99698 TOP3BP1-201ENST00000420768 1380 ntBASIC11.28□□□□□ -0.6
LYSTQ99698 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.27□□□□□ -0.6
LYSTQ99698 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
LYSTQ99698 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.27□□□□□ -0.6
LYSTQ99698 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.27□□□□□ -0.6
LYSTQ99698 BCRP2-202ENST00000447763 634 ntBASIC11.27□□□□□ -0.6
LYSTQ99698 BCRP6-201ENST00000510112 632 ntBASIC11.27□□□□□ -0.6
LYSTQ99698 BCRP7-201ENST00000511549 544 ntBASIC11.27□□□□□ -0.6
LYSTQ99698 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.27□□□□□ -0.6
LYSTQ99698 MPDU1-223ENST00000582151 728 ntBASIC11.27□□□□□ -0.6
LYSTQ99698 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
LYSTQ99698 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYSTQ99698 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.27□□□□□ -0.6
LYSTQ99698 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 AL355334.1-201ENST00000417713 215 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 KRT18P34-201ENST00000488218 1270 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 AP001258.2-201ENST00000529891 490 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.27□□□□□ -0.61
LYSTQ99698 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 MIR4706-201ENST00000582134 82 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 RNF165-205ENST00000588679 2904 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 RNF216P1-203ENST00000404404 2427 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LYSTQ99698 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LYSTQ99698 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.27□□□□□ -0.61
LYSTQ99698 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LYSTQ99698 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.27□□□□□ -0.61
LYSTQ99698 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LYSTQ99698 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.27□□□□□ -0.61
LYSTQ99698 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.27□□□□□ -0.61
LYSTQ99698 AC106872.11-201ENST00000605838 421 ntBASIC11.27□□□□□ -0.61
LYSTQ99698 AL022328.1-201ENST00000610050 478 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms