Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H4Q96RI1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 GGT3P-204ENST00000453783 1664 ntBASIC15.65■□□□□ 0.1
NR1H4Q96RI1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 WWOX-216ENST00000569818 525 ntBASIC15.65■□□□□ 0.1
NR1H4Q96RI1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NR1H4Q96RI1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
NR1H4Q96RI1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NR1H4Q96RI1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 AC026471.5-201ENST00000615068 467 ntBASIC15.64■□□□□ 0.09
NR1H4Q96RI1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NR1H4Q96RI1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms