Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SPDYE11-202ENST00000450699 704 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 RN7SL589P-201ENST00000481268 310 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 KRT8P48-201ENST00000515599 1220 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SPDYE9P-201ENST00000570642 692 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 MIR4469-201ENST00000583919 79 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 AC026120.1-201ENST00000611536 926 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SPDYE10P-202ENST00000612005 668 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SPDYE8P-202ENST00000612377 668 ntBASIC13.74□□□□□ -0.21
GAFA1Q96PS6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.74□□□□□ -0.21
GAFA1Q96PS6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 KRT18P13-201ENST00000400056 1290 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 TIMM8BP1-201ENST00000452384 211 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PRYP6-201ENST00000514804 343 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC023511.2-201ENST00000618803 211 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC073439.1-201ENST00000624121 1774 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 AC005622.1-201ENST00000636801 1703 ntBASIC13.73□□□□□ -0.21
GAFA1Q96PS6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAFA1Q96PS6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms