Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPRD1AQ96P16 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 PRORSD1P-202ENST00000563365 2154 ntBASIC17.04■□□□□ 0.32
RPRD1AQ96P16 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AC069335.1-201ENST00000489972 472 ntBASIC17.04■□□□□ 0.32
RPRD1AQ96P16 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AC027307.2-201ENST00000591252 911 ntBASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AC008267.7-201ENST00000624570 1194 ntBASIC17.04■□□□□ 0.32
RPRD1AQ96P16 UXT-AS1-201ENST00000590504 1525 ntBASIC17.04■□□□□ 0.32
RPRD1AQ96P16 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPRD1AQ96P16 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 AC079328.2-201ENST00000561241 3354 ntBASIC17.03■□□□□ 0.32
RPRD1AQ96P16 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 AL627223.1-201ENST00000416693 442 ntBASIC17.03■□□□□ 0.32
RPRD1AQ96P16 AL138918.1-201ENST00000568306 659 ntBASIC17.03■□□□□ 0.32
RPRD1AQ96P16 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 AC027612.4-201ENST00000605371 583 ntBASIC17.03■□□□□ 0.32
RPRD1AQ96P16 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms