Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 AP002490.2-201ENST00000524791 560 ntBASIC16.56■□□□□ 0.24
SIPA1Q96FS4 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 AC012645.4-201ENST00000610691 1061 ntBASIC16.56■□□□□ 0.24
SIPA1Q96FS4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.56■□□□□ 0.24
SIPA1Q96FS4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 CETN4P-206ENST00000642099 2168 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AC008894.3-201ENST00000624324 3103 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AL391256.1-201ENST00000443260 1855 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AC005225.4-201ENST00000557330 545 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AC027307.3-201ENST00000594262 1100 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 RN7SL828P-201ENST00000607615 303 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 AL589739.1-201ENST00000607720 493 ntBASIC16.55■□□□□ 0.24
SIPA1Q96FS4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIPA1Q96FS4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC244107.1-201ENST00000442033 332 ntBASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 CRB3P1-201ENST00000449338 276 ntBASIC16.54■□□□□ 0.24
SIPA1Q96FS4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms