Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.11■□□□□ 0.65
CDCA5Q96FF9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AL442647.2-201ENST00000429864 857 ntBASIC19.11■□□□□ 0.65
CDCA5Q96FF9 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.11■□□□□ 0.65
CDCA5Q96FF9 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 AC133539.2-201ENST00000604757 467 ntBASIC19.11■□□□□ 0.65
CDCA5Q96FF9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AC036164.1-201ENST00000570544 333 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 LINC01115-203ENST00000606068 577 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AL158212.4-201ENST00000624062 1286 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AL139011.1-202ENST00000642063 584 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 CYP4F24P-201ENST00000586049 1580 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 AC092068.3-201ENST00000587894 2016 ntBASIC19.1■□□□□ 0.65
CDCA5Q96FF9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
CDCA5Q96FF9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AC135050.7-201ENST00000624508 2218 ntBASIC19.09■□□□□ 0.65
CDCA5Q96FF9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AL136982.4-201ENST00000437689 1740 ntBASIC19.09■□□□□ 0.65
CDCA5Q96FF9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AC005229.1-201ENST00000392885 409 ntBASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 RPL7P3-201ENST00000441388 714 ntBASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA5Q96FF9 GPAA1P2-202ENST00000606848 1787 ntBASIC19.09■□□□□ 0.65
CDCA5Q96FF9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms